Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALFFTFLKVSQVIFLVLLIAYASFLVISLVIGGVHLYEKNERKKSLTRNKEKIPISIIVPAYNESTTIVSSIDSLLHLDYEAYEIIVVDDGSSDNTSDVLKEEFALMKISNTIDSIIATQTCKDVFQRQVGKVKLTLIVKENGGKGDALNMGINAANYDYFLCLDADSMLQVDSLSQISKSIQVDPTVIAVGGLVQVAQGVKIEQGKVASYRLPWRIIPCAQALEYDSSFLGARIFLDYLRANLIISGAFGLFKKDLVKAVG-GYDTQ--TLGEDMELVMKLHFFCRNNNIPYRICYETDAVCWSQAPTNLGDLRKQRRR |
| 3BCV Chain:A ((3-218)) | ---------------------------------------------------LIPKVSVIVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQ-------------------------YPNIKVIHKKNAGLGMACNSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKY-TCDAVFT--------------------FKLYKNKNEIHTLLKDL-IASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDVLA------NSNIVCVLP--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69481 for 1475 contacts (-47.1/contact) +
2D Compatibility (PS) -20482 + (NN) -8264 + (LL) 10660
1D Compatibility (HY) 800 + (ID) 1400
Total energy: -88167.0 ( -59.77 by residue)
QMean score : 0.266
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