Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKQGEPDPESNSALKFVLDRAKQAQVPKHVIDKAIDKAKGN-TDETFVEGRYEGFGPNGSMIIVDTLTSNVNRTAANVRTAYGKNGGNMGASGSVSYLFDKKGVIVFAGD--DADTVFEQLLEADVDVDDVEAEEGTITVYTAPTDLHKGIQALRDNGVEEFQVTELEMIPQSEVVLE-GDDLETFEKLIDALESDDDVQKVYHNVADF |
| 1LFP Chain:A ((5-240)) | --SHWAQIKHKKAKVDAQRGKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKANMPWENIERAIKKGAGELEGEQFEEVIYEGYAPGGVAVMVLATTDNRNRTTSEVRHVFTKHGGNLGASGCVSYLFERKGYIEVPAKEVSEEELLEKAIEVGAEDVQP-G-EEVHIIYTVPEELYEVKENLEKLG-VPIEKAQITWKPISTVQINDEETAQKVIKLLNALEELDDVQQVIANFEIP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 78117 for 1771 contacts (44.1/contact) +
2D Compatibility (PS) -24659 + (NN) -10011 + (LL) 436
1D Compatibility (HY) 8400 + (ID) 1600
Total energy: 50683.0 ( 28.62 by residue)
QMean score : 0.148
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