Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATYETFAAVYDAVMDD--TLYDKWTDFSLRHFPK---GKKKLLELACGTGIQSVRFSQAGYAVTGLDLSGDMLKLAKKRATSAHQSIQFIEGNMLDLSNVGKYDLITCYSDSICYMQDEVEVGDVFIEVYKALEENGVFIFDVHSTYQTDKVFPGYSYHENADDFAMVWDTYEDDAPHSIVHELTFFVQEEDGRFTRHDEVHEERTYDILTYDILLEQAGFKDVKVYADFEDK-KPTATSARWFFVAHK |
| 3PFG Chain:A ((15-244)) | ---SGEIAELYDLVHQGKGKDYHREAADLAALVRRHSPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNP----DAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLPGA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PFG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74009 for 1812 contacts (-40.8/contact) +
2D Compatibility (PS) -23963 + (NN) -5764 + (LL) 1304
1D Compatibility (HY) -2800 + (ID) 2200
Total energy: -107432.0 ( -59.29 by residue)
QMean score : 0.344
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