Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGFHQLSDKINIEILKQKTSLDLEVSQKKLAKE---------EELKNIIKGEDQRFLVIVGPCSADNPKAVLTYAKRLAKLEAAFKDKMFLVMRVYTAKPRTNGDGYKGLVHHSDKLGVF------FQARKMHYDIIRETGLLTADELLYPEMLSVMDDLVSYYAIGARSVEDQGHRFISSGIDAPVGMKNPTSGNLRVMLNAVYAAQNQQELFYQNKQ-----VRTDGNLLSHVILRGYHNADYRSIPNYHYENLLETITHYEETDLQNPFIVVDTNHDNSGKQFLEQIRIVKSVLADRQWHTKIRNYVRGFLIESYLEDGRQDKPDVFGKSITDPCLGWDKTEMLIRDIYNSL |
| 4HSO Chain:D ((5-336)) | ----YPTDDIKIKEVKELLPPIAHLYELPISKEASGLVHRTRQEISDLVHGRDKRLLVIIGPCSIHDPKAALEYAERLLKLRKQYENELLIVMRVYFEKPRTT-VGWKGLINDPHLDGTFDINFGLRQARSLLLS-LNNMGMPASTEFLDMITPQYYADLISWGAIGARTTESQVHRELASGLSCPVGFKNGTDGNLKIAIDAIGAASHSHHFLGVTKAGHSAIVHTGGNPDCHVILRGGKE------PNYDAEHVSEAAEQLRAAGVTDKLM-IDCSHANSRKDYTRQMEVAQDIAAQLE---QDGGNIMGVMVESHLVEGRQDKPEVYGKSITDACIGWGATEELLALLAGAN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HSO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106745 for 2577 contacts (-41.4/contact) +
2D Compatibility (PS) -33584 + (NN) -14657 + (LL) 1124
1D Compatibility (HY) -19600 + (ID) 6000
Total energy: -179462.0 ( -69.64 by residue)
QMean score : 0.502
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