Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MIYKVFYQETKERN-----PRREQTKTLYVTIDAANELEGRIAARKL-----VEENTAYNIEFIELLS-------DKHLEYEKETGVFELTEF-------
2L1A Chain:A ((1-107))
GAHMGGSMKIRVELINGNEHRTSSTPQQPQQNPSVSHIFDGETAVKDHIKVLLTHFKIPVDKVSSYALQNPFTLAYVEDSFLTPERLVEAEKSYFILRMKPHAIADR
General information:
TITO was launched using:
RESULT:
Template:
2L1A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14923 for 478 contacts (-31.2/contact) +
2D Compatibility (PS) -8086 + (NN) -888 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -26947.0 ( -56.37 by residue)
QMean score : 0.224
(partial model without unconserved sides chains):
PDB file :
Tito_2L1A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L1A-query.scw
PDB file :
Tito_Scwrl_2L1A.pdb
: