Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQGRIVKSLAGFYYVESDGVVYQTRARGNFRKKGQIPYVGDWVEFSSQDQSEGYILSIEERKNSLVRPPIVNIDQAVVIMSAKEPDFNANLLDRFLVLLEYKMIQPIIYISKLDLLDDLVVIDDIREHYQNIGYVFCYSQEELLPLLADKVTVFMGQTG--VGKSTLLNK-------IAPELKLETGEISDSL----GRGRHT-TRAVSFYNVHKGKIADTPGFSSLDYEVDNAEDLNESFPELRRLSHFCKFRSCTHTHEPKCAVKEALTQGQLWQVRYDNYLQFLSEIENRRETYKKVIKRK |
| 1XO1 Chain:A ((19-290)) | ----------RRNLMIVDGTNLGFRFP------FASSYVSTIQSLAKSYSARTTIVLGDKG-KSVFRLEHLP------------EYAFFEYLKDAFELCKT-TF-PTFTIRGVE-ADDMAAYIVKLIGHLYDHVWLISTDGDWDTLLTDKVSRFSFTTRREYHLRDMYEHHNVDDVEQFISLKAIMGDLGDNIRGVEG----IGAKRGYNIIREFGNVLDIIDQLPLPGKQKYIQNLNASEELLFRNLILVDLPTYCVDAIAA------VG--------QDVLDKFTKDILEIAE--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XO1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57674 for 1841 contacts (-31.3/contact) +
2D Compatibility (PS) -24526 + (NN) -6521 + (LL) 5496
1D Compatibility (HY) -4800 + (ID) 1900
Total energy: -89925.0 ( -48.85 by residue)
QMean score : 0.297
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