Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKKRYSKNSHNLITLLGIVVLASLISDFWSEVIATLLIIGGGYCAYYVYDKKRLKRFTSNQRIEALKSDIKETDQDIRHLEILKKDNRSKEYIKLAHQILPQLDLIRNEANQLQKAIEPNIYKRITKKANTFSNEINEQLIKLHASPELEPISDQEDEMIRIAPELKPFYHNIQDDHFAILKKIEEADNKAELAAIHQANMKRFTDVLAGYIRIKQSPKNFNNAKERLEQALQAIKKFNLDLDETLRQLNESDMKDFDVSLRMMQDERNSK |
| 4P3F Chain:A ((18-214)) | ---------DSLSLEILQIIKESQQQHGLRHG------------------DFQRYRGYCS-RRQRRLRKTLNFKMGNRHKFTGKKVTEDLLTDNRYLLLVLMDAERAWSYAMQLKQ----------------------EARKRFHLLSRLRKAVKHAEELERLCESNR-------------------------VDAKTKLEAQAYTAYLSGMLRFEH--QEWKAAIEAFNKCKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIG-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4P3F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 684 for 1436 contacts (0.5/contact) +
2D Compatibility (PS) -20908 + (NN) -7456 + (LL) 5264
1D Compatibility (HY) -4400 + (ID) 1400
Total energy: -28216.0 ( -19.65 by residue)
QMean score : 0.331
|
|
|