Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQLNSSFMIGKVEIPHRTVLAPMAGITN----SA-------FRTIAKEFGAGLVVMEMISEKGLLYNNEK--------T---LHML-H-IDENEHPMSIQLFGG------------------------DA------------EGLKRAADFIQSNTKADIVDINMG---------CPVNKVVKNEAGAKWLRDPEKIYHIVKEVTSVL--DIPLTVKMRTGWSD----S-SNAIENALAAESAGVSALAMHGRTREQ--MYTG-TCDHETLGKVAKAVTSIPFIANGDIRTVHDAKFMIEEIGADAIMVGRGARSNPYIFTQINHFFETGEILPDLPFEKMLDVAEDHLTRLVNLKGETIAVREFRGLAPHYLRGKSGAAKIRGAVSRAETLAEVQELFAGLR |
| 3KRU Chain:A ((2-325)) | -SILHMPLKIKDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRA-IGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKKIVDICKANGAVMGIQLAHAGRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANL-AGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIK-DKVDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRC-NIKTSAVGLITTQELAEEILSNERADLVALGRELLRNPYWVLHTYTSKEDWPKQYERAFK---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137064 for 1962 contacts (-69.9/contact) +
2D Compatibility (PS) -26019 + (NN) -6027 + (LL) 4712
1D Compatibility (HY) -7200 + (ID) 2400
Total energy: -173998.0 ( -88.68 by residue)
QMean score : 0.445
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