Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKILAACGAGVNSSHQIKDAIETQLGD-RGYNVHCDAVMVKDITEEMVNKYDIFTPIAKTDLGFNVPIPVVEAGPILYRIPVMSEPVFTALEQVIKEHNLS
2ARK Chain:A ((4-62))
MGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRL--KHVDEATKEDVLWADGLAVGSPTNMGLVSWKMKRFFDDVLGDLWGEIDGKIACAFSSSGGWGGG
General information:
TITO was launched using:
RESULT:
Template:
2ARK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30977 for 371 contacts (-83.5/contact) +
2D Compatibility (PS) -6367 + (NN) -1040 + (LL) 68
1D Compatibility (HY) 0 + (ID) 550
Total energy: -38866.0 ( -104.76 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_2ARK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ARK-query.scw
PDB file :
Tito_Scwrl_2ARK.pdb
: