Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKCLTLNTHSWMEVNAL-KKLFDLAEHIFREKYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLKPLKPEDILVSAVDDETDYH-TRRALVAETTLND---KVVTVVSLHLSWFEKGFAEEWKRLETTLLEVETP-----LLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMAD---IDGWEGNKKALKVDHIFTSEDLSISSSQVVFEGGEAPVVSDHYGLEITMDF |
| 2DNJ Chain:A ((1-260)) | -LKIAAFNIRTFGETKMSNATLASYIVRIVR-RYDIVLIQEVRDS----------------------HLVAVGKLLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLF----RPNKVSVLDTYQYDDDSFSREPAVVKFSSHSTKVKEFAIVALHSA--PSDAVAEINSLYDVYLDVQQKWHLNDVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTATSTNCAYDRIVVAGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DNJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85661 for 1996 contacts (-42.9/contact) +
2D Compatibility (PS) -25466 + (NN) -5335 + (LL) 1532
1D Compatibility (HY) -7600 + (ID) 2700
Total energy: -125230.0 ( -62.74 by residue)
QMean score : 0.338
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