Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIVEGVSLHLIKNQQFKTNHLTFRFSGDFNN---KTVARRSLVAQMLVTANAKYPKVQEFREKLASLYGASLSTKISTKGLVHIVDIDIVFVKNTFTLEQENIVEQIITFLEDMLFSPLISLEQYQTSIFDTEKKNLIQYLEADIEDNFYSSDLALKSLFYNNKTLRLPKYGTASLVESE----NSFTAYQEFQKMLKEDQLDIFVVGDFDDYRMIQAF-NRMAFEPRHKVLAFD--YTQTYE-NITRSQVEDKDVNQSIMQLAYHLPITYKDEDYFALIVFNGLFGAFAHSLLFTEIREKQGLAYTIGSQFDS----FTGLFTIYAGIDK---ENRERFLKLINKQFNNIKMGRFSSTLLKQTKDILKMNYVLAS-DNPKVIVDHIYHEHYLDQFHTSALFIDKVDDVTKSDIVSVATKLKLQAFYFLEGN |
| 1Q2L Chain:A ((24-431)) | IRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMH-GGSHNASTAPY----RTAFYLEVEND--------ALPGAVDRLADAIAEP-----LLDKKYAERERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQALKDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKGIIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQK-QGLVEGISANSDPIVNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMTPQNARIWYIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q2L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205489 for 3104 contacts (-66.2/contact) +
2D Compatibility (PS) -40638 + (NN) -7759 + (LL) 1688
1D Compatibility (HY) -2000 + (ID) 1950
Total energy: -256148.0 ( -82.52 by residue)
QMean score : 0.361
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