Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIRQLRYFITIAQEQKITSAAKKLHMAQPPLSRQLKQLEDELGVVLFDRNKKKQMTLTYEGAVFLKRAKEILHRFEDAVIEVQELKEEVAGTLAVGSTIYCA-ALMLEKVTQIKERYPHLTFNIWENEPATLLELLESRQIDAAVTTTLIKSDTVQFKQLDDIPCVLVLSDEAGYPCGDTIKMVDIPSFPLILLRPVNGKGVYNQVMNEFHRLNL--EPRIVCECHDSATLLSLVSSGFGASILPVTMIPVHMR-NHVHTVHIENN-PFIMTPAVMWRTDSYLPKPAQQFLDLF
3HHG Chain:A ((3-289))TNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRT-TRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLSVDSAMPMVLHLLAPLAAKFNERYPHIRLSLVSSE---GYINLIERKVDIALRAGELDDSGLRARHLFDSRFRVIASPEYLAKHGTPQSTEELAGHQCLGFT--EPGSLNT-W-AVLDAQGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFL


General information:
TITO was launched using:
RESULT:

Template: 3HHG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1204 -177885 -147.75 -630.80
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -147.75
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.388

(partial model without unconserved sides chains):
PDB file : Tito_3HHG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HHG-query.scw
PDB file : Tito_Scwrl_3HHG.pdb: