Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIADQTFVKKVNQKLLLKEILKNSPISRAKLSEMTGLNKSTVSSQVNTLMKENLVFEIGQGQSSGGRRPVMLVFNKKAGYSIGIDVGVDYISGILTDLEGTIILDQHHHLES-NSP-EITKDILIDMIHHFITRMPQSPYGLIGIGICVPGLIDKN-QKIVFTPNSNWRDIDLKSFIQEKFNVPVFIENEANAGAYGEKVFGAAKNHNNIIYASISTGIGIGVIINNHLYRGVSGFSGEMGHMTIDFNGPKCSCGNRGCWELYASEKALLKSLQTKEKKVSYQDIIDLAHLNDIGTLNALQNFGFYLGIGLTNILNTFNPQAIILRNSIIESHPMVLNSIRSEVSSRVYPQLGNSYELLPSSLGKNAPALGMSSIVIEHFLDIVKM
2HOE Chain:A ((22-376))-------------ISRILKRIM-KSPVSRVELAEELGLTKTTVGEIAKIFLEKGIVVEEKDSP----RPTKSLKISPNCAYVLGIEVTRDEIAACLIDASMNILAHEAHPLPSQSDREET-LNVMYRIIDRAKDMMEKLGSKLSALTVAAPGPIDTERGIIIDPRNFPLSQIPLANLLKEKYGIEVWVENDADMGAVGEKWYT--KRDDSFAWILTGKGIGAGIIIDGELYRGENGYAGEIGYTRVFNG------NEYVFLEDVCNENVVLKHVLS----MGFS-LAEARDSGDVRVKEYFDDIARYFSIGLLNLIHLFGISKIVIGGFFKELGENFLKKIKIEVETHLLY--KHSVDMSFSKVQEPVIAFGAAVHALENYLER---


General information:
TITO was launched using:
RESULT:

Template: 2HOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1827 -253027 -138.49 -729.18
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -138.49
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.471

(partial model without unconserved sides chains):
PDB file : Tito_2HOE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HOE-query.scw
PDB file : Tito_Scwrl_2HOE.pdb: