Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKLDEMTAYLPPFLTKLKEMAELLKAEAPEFEKQNNSIFDLTDQLFVTTATWGLERWEKILNVPRESGDTDEIRRLRLISKMSNIPPATYRAIEHALNRFLKNPSAQVRLLPGEYRFKVDIDIDDMQHMSELIETLENMKPAHLAYTLRAALNEPLQIKDTVILNNRRYRKASELKVGYSVTLNNNEVVLV
3ZMD Chain:A ((27-174))TRWLT--DTEQCAWRTHLEVNRLLTHQLEKDLQPFGLT-----------------MNDYEILVNLSESEG----DRMR-MSDLATATMQSKSRLSHQITRMENANLVRRENCESDRRGL------FAVLTEHGLETMRKVAPHHVA-SVRRHFIDLLAPEDLTELDKALKPIAEHLRGQ-------------


General information:
TITO was launched using:
RESULT:

Template: 3ZMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 409 -26469 -64.72 -178.84
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -64.72
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.393

(partial model without unconserved sides chains):
PDB file : Tito_3ZMD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZMD-query.scw
PDB file : Tito_Scwrl_3ZMD.pdb: