Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------MMSVLARMRVMRHRAWQGLVLLVLALLLSSCGWRGISNVAIPGGPGTGPGSYTIYVQMP-DTLAINGNSRVMVADVWVGSIRAIKLKNWVATLTLSLKKDVTLPKNATAKIGQTSLLGSQHVELAAPPDPSPVPLKDGDTIPLKRSSAYPTTEQTLASIATLLRGGGLV---NLEGIQQEINAIVTGRADQIRAFLGK-----------LDTFTDELNQQRDDITRAI-----DSTNRLLAYVGGRSEVLNR------------VLTDLPPLIKHFAD-KQELLINASDAVGRLSQSAD---------------QYLSAARGDLHQDLQALQCPLKELRRAAPYLVGALKLILTQPFDVDTVPQLVR-----GDYMNLSLTLDLTYSAIDNAFLTGTGFSGALRALEQ-----SFGRDPETMIPDIRYTPNPNDAPGGPLVERGNRQC---- |
2XU0 Chain:A ((12-487)) | SPTLSESHKSARNVLENIGIKIYNQEIKKKNPYEQQLKGTLDGNSCNLDHLFGRKPCYGREQNRFDENAEAYCNSDKIRGNENNANGAACAPPRRR---HICDQNLEFLDNKNTNTAHDLLGNVLVTAKYEGNYIVNDHPDKNSN----------GNKAGICTSLARSFADIGDIVRGRDMFLPNKDDKVQKGLQVVFKKIYKSLTPEARKHYAHGDGSGNYAKLREDWWTINREQIWKALTCSAPYYADYFRKGSDGTLHFSSHGKCGHNEGAPPTYLDYVPQFLRWFEEWSEEFCRIKKIKIDKVKKECRDEQNKKYCSGDGHDCTQTNLAHNQIFVDLDCPRC-QDQCIKYNEWIVKKLEEFYKQNLKYSMEIQKWKKTKNNYYDKEFYENLDKKSYSTIDKFLNLLNNGKHCHDNKDEKNKIDFNKPIKTFSISEYCKT----CPLYGVTCTNRGICIHNS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XU0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52195 for 2727 contacts (-19.1/contact) +
2D Compatibility (PS) -39008 + (NN) -12919 + (LL) 12
1D Compatibility (HY) -3600 + (ID) 2150
Total energy: -109860.0 ( -40.29 by residue)
QMean score : 0.254
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