Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNDKMLARIAALLRQ---AEGTDNPHEA---DAFMSTAQRLATAASIDLAVAR-SHAGNRSPAQAPTQRT-------ITIGAAGTRGLRTYV--QLFVLIAAANDVRCDV--ASNSTFVYAYGFAEDIDTSHALYA----SLVVQMVRASDAYLASGAHRPTPTITARLN-----------------------------------------------FQLAFGARVGQRLADAREQTRQEA---------TKDRDRPPGTAIALRDKD--IELHEYYRRSSKARGAWRASRATAGYSSAARRAGDRAGRQARLGNNPELPGARAALGR |
| 3LRV Chain:A ((11-343)) | APKWPILKNLELLQAQNYSRNIKTFPYKELNKSMYYDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPAIISRGPCN-RLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGH----NTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTKDEESALCLADFTDMDVVCGD-GGIAAILKTNDSFN--IVALTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LRV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37186 for 1620 contacts (-23.0/contact) +
2D Compatibility (PS) -23527 + (NN) 5756 + (LL) 500
1D Compatibility (HY) -10800 + (ID) 2200
Total energy: -67457.0 ( -41.64 by residue)
QMean score : -0.044
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