Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQGPRERMVVSAALLIRERGAHATAISDVLQHSGAPRGSAYHYFPGGRTQLLCEAVDYAGEHVAAMINEAEG-GL-ELLDALIDKYRQQLLSTDFRAGCPIAAVSVEAGDEQDRERMAPVIARAAAVFDRWSDLTAQRFIADGIPPDRAHELAVLATSTLEGAILLARVRRDLTPLDLVHRQLRNLLLAELPERSR
3FRQ Chain:A ((7-185))
-LKSDDEVLEAATVVLKRCGPIEFTLSGVAKEVGLSRAALIQRFT-NRDTLLVRMMERGVEQVRHYLNAIPIGAGPQGLWEFLQVLVRSMNTRN-DFSVNYLISWYE-LQ------VPELRTLAIQRNRAVVEGIRKRL-----PPGAPAAAELLLHSVIAGATMQWAVDPDGELADHVLAQIAAILCLMFPEH--
General information:
TITO was launched using:
RESULT:
Template:
3FRQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66788 for 1260 contacts (-53.0/contact) +
2D Compatibility (PS) -19347 + (NN) -13350 + (LL) 1140
1D Compatibility (HY) -8400 + (ID) 1550
Total energy: -108295.0 ( -85.95 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_3FRQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FRQ-query.scw
PDB file :
Tito_Scwrl_3FRQ.pdb
: