Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHGMVLGKFMPPHAGHVYLCEFARRWVDELTIVVGSTAAE--PIPGAQRVAWMRELFPFDR-VVHLANENPQRPWEHPDFWDIWKASLQGVLATRPDFVFGAEPYNA-----DFAQV----L--GARFVAVDHGRTVVPVTATDIRADPL--GHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKWVPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLAGGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVITGGWEERLSVSLRAVEELVRARR |
| 1VLH Chain:A ((13-167)) | -MKAVYPGSFDPITLGHVDIIKRALSIFDELVVLVTENPRKKCMFTLEERKKLIEEVLSDLDGVK-VDVHH-------G----LLVDYLKKH---GIKVLVRGLRAVTDYEYELQMALANKKLYSDLETVFLIASEKFSFISSSLVKEVALYGGDVTEWVPPEVARALNEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1VLH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -91539 for 1056 contacts (-86.7/contact) +
2D Compatibility (PS) -14737 + (NN) -4060 + (LL) 13192
1D Compatibility (HY) -8000 + (ID) 950
Total energy: -106094.0 ( -100.47 by residue)
QMean score : 0.324
|
|
|