Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSTNNLTPSSLREAFGHFPTGVVAIAAEVDGVRQGLAASTFVPVSLEPPLVSFCVQNTSTTWPKLTGVPMLGISVLGEAHDAAVRTLAAKTGDRFAGLETVSN-DAGAVFIKGTSVWLESAIEQLVPAGDHTIVVLRVNQVKVDPNVAPIVFHRSVLRRLGV
4L82 Chain:A ((13-167))
------VTESQFKDTMSRFPQGVTIITTNCNNELFGFTASSLTSVSLKPPLILFCLNKNSFSINSFQKSDKFAVSILAENQIDISKHFAKSQPNKFTKIAYELGNKTNCPLINGATCYIECNKYASYDAGDHVIFIGEVINTAIKNDLKPLLYFHKSYTNL--
General information:
TITO was launched using:
RESULT:
Template:
4L82.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94623 for 1155 contacts (-81.9/contact) +
2D Compatibility (PS) -16678 + (NN) -3633 + (LL) 12
1D Compatibility (HY) -11600 + (ID) 1750
Total energy: -128272.0 ( -111.06 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_4L82.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L82-query.scw
PDB file :
Tito_Scwrl_4L82.pdb
: