Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------MANPFVKAWKYLMALFSSKIDEHADPKVQIQQAIEEAQRTHQALTQQA--AQVIGNQRQLEMRLNRQLADI----------EKLQVN-VRQ-ALTLA---DQATAAGDAAKATEYNNAAEAFAAQLVTAEQSVEDLKTL-HDQALSAAAQAKKAVERNAMVLQQKIAERTKLLSQLEQAKMQEQVSASLRSMSELAAPGNTPSLDEVRDKIERRYANAIGSAELAESSVQGRMLEVEQAGIQMAGHSRLEQIRASMRGEALPAGGTTATPRPATETSGGAIAEQPYGQ |
| 3M1G Chain:A ((29-361)) | NYIDDRIVADVPAGSEPIAQEDGTFHWPVEAGRYRLVAARACPWAHRTVITRRLLG------LENVISLGLTGPTHDITVPALVEESSKKVVTNDYPSITIDFNLEWKQFHREGAPNLYPAELREEMAPVMKRIFTEVNNGVYRTGFAGSQEAHNEAYKRLWVALDWLEDRLSTRRYLMGDHITEADIRLYPTLVRFDAVYHGHFKCGRNKITEM------PNLWGYLRDLFQTPGFGDTTDFTEIKQHYYITHAEINPTRIVPVGPDLSGFATPHG--------------REKLGGSPFAEGVTL----PGPIPAGEEVKNPEPFQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M1G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 37424 for 1791 contacts (20.9/contact) +
2D Compatibility (PS) -25350 + (NN) -10151 + (LL) 2424
1D Compatibility (HY) -5200 + (ID) 1650
Total energy: -2503.0 ( -1.40 by residue)
QMean score : 0.267
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