Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFPGSVIRKLSHSEEVFAQ--------YEVFTSMTIQLRGVIDVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGIC-VID----GT----AATNGSPSGNAELRLDQSV-SL-LHLQLI-LREGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAVTTGDPGPITPQPTPLSMEAVL---AQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWLSKQQTSDLMAFGREHRLSLNAVVAAAILLTEWQLRNTPHVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIGPNTDIVDLASDIVATLRADLANGVIQQSGLHFGTAFEGTPPGLPPLVFCTDATSFPTMRTPPGLEIEDIKGQFYCSISVPLDLYSCAVYAGQLIIEHHGHIAEPGKSLEAIRSLLCTVPSEYGWIME |
| 4ZXJ Chain:A ((2-326)) | -------LPLVAAQPGIWMAEKLSELPSAWSVAHYVELTGEVDSPLLARAVVAGLAQADTLRMRFTEDNG-EVWQWVDDALTFELPEIIDLRTNIDPHGTAQALM-QAD-LQQDLRVDSGKPLVFHQLIQVADNRWYWYQRYHHLLVDGFSFPAITRQIANIYCTWLRGEPTPASPFTPFADVVEEYQQYRESEAWQRDAAFWAEQRRQLPPP----ASLSPAPLPGRSASADILRLKLEFTDGE--FRQLATQLSGVQRTDLALALAALWLGRLC--NRMDYAAGFIFMRRLGS---AALTATGPVLNVLPLGIHIAAQETLPELATRLAAQLKKMRRHQRYDAE--------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ZXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -121475 for 2062 contacts (-58.9/contact) +
2D Compatibility (PS) -32180 + (NN) -11686 + (LL) 5480
1D Compatibility (HY) -2000 + (ID) 2250
Total energy: -164111.0 ( -79.59 by residue)
QMean score : 0.209
|
|
|