Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKSLPGVADLRLGANHPRMWTRRVQGTVVNVGVKVLPWIPTPAKRILSAGRSVIIDGNTLDPTLQLMLSTSRIFGVDGLAVDDDIVASRAHMRAICEAMPGPQIHVDVTDLSIPGPAGEIPARHYRPSGGGATPLLVFYHGGGWTLGDLDTHDALCRLTCRDADIQVLSIDYRLAPEHPAPAAVEDAYAAFVWAHEHASDEFGALPGRVAVGGDSAGGNLSAVVCQLARDKARYEGGPTPVLQWLLYPRTDFTAQTRSMGLFGNG-FLLTKRDIDWFHTQYLRDSDVDPADPRLSPLLAESLSGLAPALIAVAGFDPLRDEGESYAKALRAAGTAVDL-RYLGSLTHGFLNLFQLGGGSAAGTNELISALRAHLSRV |
| 1JJI Chain:D ((56-308)) | ------------------------------------------------------------------------------------------------------------VEDRTIKGRNGDIRVRVYQQKPD--SPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDATKWVAENA-EELRIDPSKIFVGGDSAGGNLAAAVSIMARDS----GEDFIKHQILIYPVVNFVAPTPSLLEFGEGLWILDQKIMSWFSEQYFSREE-DKFNPLASVIFAD-LENLPPALIITAEYDPLRDEGEVFGQMLRRAGVEASIVRYRGVL-HGFINYYPVLKAARDAINQIAALL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144698 for 2246 contacts (-64.4/contact) +
2D Compatibility (PS) -27124 + (NN) -15838 + (LL) 8228
1D Compatibility (HY) -18400 + (ID) 5500
Total energy: -203332.0 ( -90.53 by residue)
QMean score : 0.513
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