Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPEIPIAAPDLLGHGRS---PWAAPWTIDANVSALAALLDNQG-DGPVVVVGHSFGGAVAMHLAAARPDQVAALVLLDPAVALDGSRVREVVDAMLASPDYLDPAEARAEKATGAWADVDPPVLDAELDEHLVALPNGRYGWRISLPAMVCYWSELARDIVLPPVGTATTLVRAVRASPAYVSDQLLAALDKRLGADFELLDFDCGHMVPQAKPTEVAAVIRSRLGPR |
| 4UHD Chain:A ((52-137)) | --EFRVIVPDLRGFGESQVIPGVA--TMEAMADDLAGLCNHLGLTGKIVLGGLSMGGYVAFAFARKYRDRLAGLILCDTRARPDSPEAKE------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40394 for 477 contacts (-84.7/contact) +
2D Compatibility (PS) -9007 + (NN) -4948 + (LL) 9768
1D Compatibility (HY) -4800 + (ID) 1550
Total energy: -50931.0 ( -106.77 by residue)
QMean score : 0.476
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