Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTQEQDQQLVERVQRGDKRAFDLLVLKYQHKILGLIVRFVHDAQEAQDVAQEAFIKAYRALGNFRGDSAFYTWLYRIAINTAKNHLVARGRRPPDSDVTAEDAEFFEGDHALKDIESPERAMLRDEIEATVHQTIQQLPEDLRTALTLREFEGLSYEDIATVMQCPVGTVRSRIFRAREAIDKALQPLLREA
1H3L Chain:A ((28-102))
-------------STAERSARFERDALEFLDQMYSAALRMTRNPADAEDLVQETYAKAYASFHQFREGTNLKAWLYRILTNTFINSYR---------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1H3L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51511 for 485 contacts (-106.2/contact) +
2D Compatibility (PS) -8295 + (NN) -4789 + (LL) 9688
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -58707.0 ( -121.05 by residue)
QMean score : 0.668
(partial model without unconserved sides chains):
PDB file :
Tito_1H3L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H3L-query.scw
PDB file :
Tito_Scwrl_1H3L.pdb
: