Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLQIRGYAAQSASTPLTAHRFERRAPRADDLVIDILYCGVCHSDLHQARNEWHNSLYPLVP---GHEIIGRVASVGEAVSGFAVGELVGVGCMVDSCRHCAACSEGLEQYCA--EYPTLTYNGRDRHDGLPTFGGYSERIVVSARFVLRIPQGLDPKA---AAPLLCAGITSYSPLRH--WKVGPGSRVAVVGLGGLGHMGLKFARALG-AEVALFTRSPGKEEEARRLGADQVILS-TDP--QRMAAVAGR-FDLILDTVPHQH--DLNPYLATLKRDGTLVLVGLLEPLE-PAVHGAQLVMGRRSIAGSAIGGIAETQEMLDFCAAHGIACDIEMIEIQQINQAYERMLASDVKYRFVIDMASLQKSF |
| 1H2B Chain:A ((43-357)) | ------------------------------DVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGT-CLACRAGEDMHCENLEFP-----------GLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYL--LGRMGRLIIVGYGGELRFPTI---RVISSEVSFEGSLVGNYVELHELVTLALQGKVRVEVDIHKLDEINDVLERLEKGEVLGRAVL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -229169 for 2533 contacts (-90.5/contact) +
2D Compatibility (PS) -31811 + (NN) -5607 + (LL) 3492
1D Compatibility (HY) -20800 + (ID) 5200
Total energy: -289095.0 ( -114.13 by residue)
QMean score : 0.453
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