Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFSGNWKIIRSENFEEMLKALGVNMMMRKIAVAAASKPAVEIKQENDTFYIKTSTTVRTTEINFKIGEEFEEQTVDGRPCKSLVKWESGNKMVCEQRLLKGEGPKTSWSRELTNDGELILTMTADDVVCTRVYVRE
3F8A Chain:A ((1-137))
-PNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTVWTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTLELTNDGELIETMTADDVVCTKVYVRE
General information:
TITO was launched using:
RESULT:
Template:
3F8A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31796 for 964 contacts (-33.0/contact) +
2D Compatibility (PS) -15399 + (NN) -5682 + (LL) 208
1D Compatibility (HY) -17600 + (ID) 6200
Total energy: -76469.0 ( -79.32 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_3F8A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F8A-query.scw
PDB file :
Tito_Scwrl_3F8A.pdb
: