Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPGCMSCKCVLS
3RS4 Chain:A ((1-166))
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEY--MRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3RS4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100656 for 1328 contacts (-75.8/contact) +
2D Compatibility (PS) -17723 + (NN) -2277 + (LL) 604
1D Compatibility (HY) -23200 + (ID) 8200
Total energy: -151452.0 ( -114.05 by residue)
QMean score : 0.671
(partial model without unconserved sides chains):
PDB file :
Tito_3RS4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RS4-query.scw
PDB file :
Tito_Scwrl_3RS4.pdb
: