Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLNSSDDGTQGCMGLPCVVM
4LRW Chain:A ((3-168))
-TEYKLVVVGACGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETSLLDILDTA-----------YMRTGEGFLLVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKSDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREIRKHK----------------------
General information:
TITO was launched using:
RESULT:
Template:
4LRW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110829 for 1243 contacts (-89.2/contact) +
2D Compatibility (PS) -17073 + (NN) -7892 + (LL) 1752
1D Compatibility (HY) -19600 + (ID) 6900
Total energy: -160542.0 ( -129.16 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_4LRW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LRW-query.scw
PDB file :
Tito_Scwrl_4LRW.pdb
: