Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPLLILTFVAAALAAPFDDDDKIVGGYNCEENSVPYQVSLNSGYHFCGGSLINEQWVVSAGHCYKSRIQVRLGEHNIEVLEGNEQFINAAKIIRHPQYDRKTLNNDIMLIKLSSRAVINARVSTISLPTAPPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCNGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTIAANS
1F0T Chain:A ((21-243))
-----------------------IVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN-
General information:
TITO was launched using:
RESULT:
Template:
1F0T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128414 for 1897 contacts (-67.7/contact) +
2D Compatibility (PS) -24209 + (NN) -9885 + (LL) 1716
1D Compatibility (HY) -28400 + (ID) 8400
Total energy: -197592.0 ( -104.16 by residue)
QMean score : 0.796
(partial model without unconserved sides chains):
PDB file :
Tito_1F0T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F0T-query.scw
PDB file :
Tito_Scwrl_1F0T.pdb
: