Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQQKSLTLIVALTTSYGIGRSNSLPWKLKKEISYFKRVTSFVPTFDSFESMNVVLMGRKTWESIPLQFRPLKGRINVVITRNESLDLGNGIHSAKSLDHALELLYRTYGSESSVQINRIFVIGGAQLYKAAMDHPKLDRIMATIIYKDIHCDVFFPLKFRDKEWSSVWKKEKHSDLESWVGTKVPHGKINEDGFDYEFEMWTRDL
1KLK Chain:A ((4-206))
---QKSLTLIVALTTSYGIGRSNSLPWKLKKEISYFKRVTSFVPTFDSFESMNVVLMGRKTWESIPLQFRPLKGRINVVITRNESLDLGNGIHSAKSLDHALELLYRTYGSESSVQINRIFVIGGAQLYKAAMDHPKLDRIMATIIYKDIHCDVFFPLKFRDKEWSSVWKKEKHSDLESWVGTKVPHGKINEDGFDYEFEMWTRDL
General information:
TITO was launched using:
RESULT:
Template:
1KLK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139471 for 1497 contacts (-93.2/contact) +
2D Compatibility (PS) -22041 + (NN) -9872 + (LL) 248
1D Compatibility (HY) -30800 + (ID) 10150
Total energy: -212086.0 ( -141.67 by residue)
QMean score : 0.762
(partial model without unconserved sides chains):
PDB file :
Tito_1KLK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KLK-query.scw
PDB file :
Tito_Scwrl_1KLK.pdb
: