Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSRRVDVMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFRGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDLLNP
4NT0 Chain:B ((2-223))
-RSRRVDVMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISP---------GETLRFADAIIVGRSIYLADNPAAAAAGIIESIK-----
General information:
TITO was launched using:
RESULT:
Template:
4NT0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -186860 for 1777 contacts (-105.2/contact) +
2D Compatibility (PS) -22800 + (NN) -4552 + (LL) -184
1D Compatibility (HY) -31200 + (ID) 10600
Total energy: -256196.0 ( -144.17 by residue)
QMean score : 0.774
(partial model without unconserved sides chains):
PDB file :
Tito_4NT0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NT0-query.scw
PDB file :
Tito_Scwrl_4NT0.pdb
: