Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK |
| 4F62 Chain:A ((3-292)) | MNLKQFSTYTQSRVDQYLEQQLSDYAP-ANQLHNAMRYSLF-GGKRIRPMLTYASAQLVGDISSLTDASAAALESIHAYSLIHDDLPAMDN-------PTCHIQFDEATAILAGDALQTFAFELLSNPT-SA-QPELAIKLIQELVVASGRNGMITGQMIDLSSENKNISLAELEQMHVHKTGALIKASVRMGALSTGQVKPEQLAKLDAYAHAIGLAFQVQDDIIDLT----------------NKATYPKLLGLDGAKALVVRLHEQAIAQISEF---GDKSQPLTDLANYIID--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4F62.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -144613 for 2241 contacts (-64.5/contact) +
2D Compatibility (PS) -29236 + (NN) -14144 + (LL) 1976
1D Compatibility (HY) -22400 + (ID) 6300
Total energy: -214717.0 ( -95.81 by residue)
QMean score : 0.551
|
|
|