Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDDITARVQTQEHAIYPLVISWFADGRLKMHENAAWLDGQRLPPQGYAADE
1C3E Chain:B ((1-209))
MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDDITARVQTQEHAIYPLVISWFADGRLKMHENAAWLDGQRLPPQGYA---
General information:
TITO was launched using:
RESULT:
Template:
1C3E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -168795 for 1731 contacts (-97.5/contact) +
2D Compatibility (PS) -23481 + (NN) -12483 + (LL) 172
1D Compatibility (HY) -28000 + (ID) 10450
Total energy: -243037.0 ( -140.40 by residue)
QMean score : 0.849
(partial model without unconserved sides chains):
PDB file :
Tito_1C3E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C3E-query.scw
PDB file :
Tito_Scwrl_1C3E.pdb
: