Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
YSLFPNSPKWTSKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERWTDGSSLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLYGKRSNSRKK
3BA0 Chain:A ((1-160))
------GPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDDHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHS-GGTNLFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDP------
General information:
TITO was launched using:
RESULT:
Template:
3BA0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66663 for 1229 contacts (-54.2/contact) +
2D Compatibility (PS) -17410 + (NN) -13122 + (LL) 216
1D Compatibility (HY) -12800 + (ID) 4500
Total energy: -114279.0 ( -92.99 by residue)
QMean score : 0.689
(partial model without unconserved sides chains):
PDB file :
Tito_3BA0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BA0-query.scw
PDB file :
Tito_Scwrl_3BA0.pdb
: