Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATPPKRSCPSFSASSEGTRIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYESLVEKVKEFLSTL
2ZI6 Chain:C ((39-279))
-------------------RIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWS----------------KNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLN------EKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQF---LELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYESLVEKVKEFLSTL
General information:
TITO was launched using:
RESULT:
Template:
2ZI6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131074 for 1679 contacts (-78.1/contact) +
2D Compatibility (PS) -22629 + (NN) -4924 + (LL) 1716
1D Compatibility (HY) -32400 + (ID) 10650
Total energy: -199961.0 ( -119.10 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_2ZI6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZI6-query.scw
PDB file :
Tito_Scwrl_2ZI6.pdb
: