Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAMVVSSWRDPQDDVAGGNPGGPNPAAQAARGGGGGAGEQQQQAGSGAPHTPQTPGQPGAPATPGTAGDKGQGPPGSGQSQQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPNPGQYALTNGDPLNGHCYLSGYISLLLRAEPYPTSRYGSQCMQPNNIMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMD-HIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSFNWPYMSIQCS
2NXX Chain:A ((35-231))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNTTVNNICQATHKQLFQLVQWAKLVPHFTSLPLTDQVQLLRAGWNELLIAAFSHRSMQAQ-DAIVLATGLTVNKSTAH-AVGVGNIYDRVLSELVNKMKEMKMDKTELGCLRAIILYNPDVRGIKSVQEVEMLREKIYGVLEEYTRTTHPNEPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDVPIDTFLMEMLEG--------------


General information:
TITO was launched using:
RESULT:

Template: 2NXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134785 for 1463 contacts (-92.1/contact) +
2D Compatibility (PS) -20931 + (NN) -10733 + (LL) 5604
1D Compatibility (HY) -17600 + (ID) 3850
Total energy: -182295.0 ( -124.60 by residue)
QMean score : 0.604

(partial model without unconserved sides chains):
PDB file : Tito_2NXX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NXX-query.scw
PDB file : Tito_Scwrl_2NXX.pdb: