Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLPPGSNGTAYPGQFALYQQLAQGNAVGGSAGAPPLGPSQVVTACLLTLLIIWTLLGNVLVCAAIVRSRHLRANMTNVFIVSLAVSDLFVALLVMPWKAVAEVAGYWPFGAF-CDVWVAFDIMCSTASILNLCVISVDRYWAISRPFRYKRKMTQRMALVMVGLAWTLSILISFIPVQLNWHRDQAASWGGLDLPNNLANWTPWEEDFWEPDVNAENCDSSLNRTYAISSSLISFYIPVAIMIVTYTRIYRIAQVQIRRISSLERAAEHAQSCRSSAACAPDTSLRASIKKETKVLKTLSVIMGVFVCCWLPFFILNCMVPFCSGHPEGPPAGFPCVSETTFDVFVWFGWANSSLNPVIYAFNADFQKVFAQLLGCSHFCSRTPVETVNISNELISYNQDIVFHKEIAAAYIHMMPNAVTPGNREVDNDEEEGPFDRMFQIYQTSPDGDPVAESVWELDCEGEISLDKITPFTPNGFH
2VT4 Chain:B ((17-298))---------------------------------------------LMALVVLLIVAGNVLVIAAIGSTQRLQ-TLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDED--------PQAL-------KCYQDPGC----CDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR---------------------------------EHKALKTLGIIMGVFTLCWLPFFLVNIVNVF----------NRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLAF------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2VT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -237883 for 2012 contacts (-118.2/contact) +
2D Compatibility (PS) -27061 + (NN) -4638 + (LL) 9188
1D Compatibility (HY) -36400 + (ID) 6500
Total energy: -303294.0 ( -150.74 by residue)
QMean score : 0.321

(partial model without unconserved sides chains):
PDB file : Tito_2VT4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VT4-query.scw
PDB file : Tito_Scwrl_2VT4.pdb: