Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPFMQKLGFGTGVNVYLMKRSPRGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRAFTEANDGSLCLAMEYGGEKSLNDLIEERYKASQDPFPAAIILKVALNMARGLKYLHQEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMT-LSIPHINLSNDDDDEDKTFDESDFDDEAYYAALGTRPPINMEELDESYQKVIELFSVCTNEDPKDRPSAAHIVEALETDV |
| 4FYO Chain:A ((23-277)) | -----------------------------------KELGSGNFGTVKKGYYQMKKV-VKTVAVKIL---------PALKDELLAEANVMQQLDNPYIVRMIGICEA--ESWMLVMEMAELGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEE-SNFVHRDLAARNVLLVTQ-HYAKISDFGLSKALRADENYYKA----KWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--------------SEVTAMLEKGERMGCPA-GCPREMY---DLMNLCWTYDVENRPGFAAVELRLRNYY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74304 for 1974 contacts (-37.6/contact) +
2D Compatibility (PS) -26892 + (NN) -17789 + (LL) 3132
1D Compatibility (HY) -16800 + (ID) 2750
Total energy: -135403.0 ( -68.59 by residue)
QMean score : 0.509
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