Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDFGSLETVVANSAFIAARGSFDGSSSQPSRDKKYLAKLKLPPLSKC--ESLRDSLSLEFESVCLEQPIGKKLFQQF-LQSAEKHLPALELWKDIEDYDTADNDLQPQK-AQTILAQYLDPQAKLFCSFLDEGIVAKFKEGPV---EIQDGLFQPLLQATLAHLGQAPFQEYLGSLYFLRFLQWKWLEAQ-PMGEDWFLDFRVLGKGGFGEVSACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILMKVHS---RFIVSLAYAFETKADLCLVMTIMNGGDIRYHIYNVNEENPGFPEPRALFYTAQIICGLEHLHQRRIVYRDLKPENVLLDNDGNVRISDLGLAVELLDGQSKTKGYAGTPGFMAPELLQ-GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKHRIISEPVKYPDKFSQASKDFCEALLEKDPEKRLGFRDETCDKLRAHPLFKDLNWRQLEAGMLMPPFIPDSKTVYAKDIQDVGAFSTVKGVAFDKTDTEFFQEFATGNCPIPWQEEMIETGIFGELNVWRSDGQMPDDMKGISGGSSSSSKSGMCLVS |
3PVU Chain:A ((30-530)) | ----------------------------------KKILLPEPSIRSVMQKYLEDRGEVTFEKI-FSQKLGYLLFRDFCLKHLEEAKPLVEFYEEIKKYEKLETEEERLVCSREIFDTYIMKEL-LACSHPFSKSAIEHVQGHLVKKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF--SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK-DKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRG----------------------DSDQELYRNFPL-TISERWQQEVAET-VFDTINAETDRLEARKKTKNKQLGHEEDYALGKDCIM |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PVU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -233929 for 3665 contacts (-63.8/contact) +
2D Compatibility (PS) -49343 + (NN) -18282 + (LL) 3092
1D Compatibility (HY) -40400 + (ID) 8350
Total energy: -347212.0 ( -94.74 by residue)
QMean score : 0.449
|
|
|