Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGSGCAWGAEPPRFLEAFGRLWQVQSRLGSGSSASVYRVRCCGNPGSPPGALKQFLPPGTTGAAASAAEYGFRKERAALEQLQ-----GHRNIVTLYGVFTIHFSPNVPSRCLLLELLDVSVSELLLYSS-HQGCSMWMIQHCARDVLEALAFLHHEGYVHADLKPRNILWSAENECFKLIDFGLSFKEGNQD-VKYIQTDGYRAPEAELQNCLAQAGLQSDTECTSAVDLWSLGIILLEMFSGMKLKHTVRSQEWKANSSA---------IID-----HIFASKA--------------------------VVNAAIP------AYHLRDLIKSMLHDDPSRRIPAEMALCSPFFSIPFAPHIEDLVMLPTPVLRLLNVLDDDYLENEEEYEDVVEDVKEECQKYGPVVSLLVPKENPGRGQVFVEYANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAYKRGYLYQTLL |
| 4IIR Chain:A ((14-350)) | ----TDAEGYYRVNIGEVLDKRYNVYGYTGQG--SNVVRARDNA-RANQEVAVKIIRNNEL-------MQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHK-----QHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIII-----------GKSYDYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFMYIEREKVTVMSTINPTKDLLADLI----LPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQE----------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148975 for 2122 contacts (-70.2/contact) +
2D Compatibility (PS) -29894 + (NN) -21614 + (LL) 9300
1D Compatibility (HY) -17200 + (ID) 3450
Total energy: -211833.0 ( -99.83 by residue)
QMean score : 0.355
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