Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AEAEAAAEVSCGDAVSALIPCGSFLVGA----VAGA----PSESCCRGAQGLRRMAGTPGARRALCRCLEQSGPSF----G---------V-----L----PDRARQLPALCKLGISIPVSPHTDCDKIQ
1B1U Chain:A ((16-109))
----------------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--------PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37750 for 413 contacts (-91.4/contact) +
2D Compatibility (PS) -6258 + (NN) 1921 + (LL) 1704
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -42033.0 ( -101.77 by residue)
QMean score : 0.280
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: