Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGQVNSALGPCLTYARGG---AG-------------------PSAVCCSGVKRLAAATQTTVDRRAVCNCLKMAVGRMS---GF-------KAGNIASIPSKCGVSVPYAVGASVDCSRVS
1PSY Chain:A ((25-117))
--------KDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV--------RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGVR---------------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41405 for 436 contacts (-95.0/contact) +
2D Compatibility (PS) -6187 + (NN) -1573 + (LL) 2168
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -50597.0 ( -116.05 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: