Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--QGGGG------GECVPQLNRLLACRAYAVPGAGDPS---AECCSALSSISQGCACSAISIMNSL-----------------------PSRCHLSQINCSA----------------
1HSS Chain:A ((5-124))
MCYPGQAFQVPALPACRPLLR--LQCN-----GSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21024 for 322 contacts (-65.3/contact) +
2D Compatibility (PS) -6749 + (NN) -5635 + (LL) 708
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -38050.0 ( -118.17 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: