Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IPVC----NIDTNDLAKCRPAVT----GNNPPPPG-PDCCAVARVANLQCLCP---------YKPYLPTVGID----PSRVRPLLANCGVNSPS---------CF--------
1HSS Chain:A ((5-124))
--MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34679 for 397 contacts (-87.4/contact) +
2D Compatibility (PS) -7316 + (NN) -142 + (LL) 64
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -45323.0 ( -114.16 by residue)
QMean score : 0.704
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: