Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-C----NINANHLEKCRPAVI----GDNPPSPI-KECCELLQAANLKCICR---------FKSVLPVLAVY----PSKVQALLSKCGLTTIPPA-------CQALRN----
1HSS Chain:A ((5-124))
MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51364 for 438 contacts (-117.3/contact) +
2D Compatibility (PS) -8020 + (NN) -1091 + (LL) 0
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -65325.0 ( -149.14 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: