Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------------------------------------------------VDCKDVNS--NLATCIPYLTGKDTAPPTTC---CDGVKNLPKIAQ-----------TTADRRAACECVKAAASHY------TINEKAASSLPKDCGAVINIPISKTTNCQQIN--------
1QPO Chain:A ((116-284))
IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVR--NAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM
General information:
TITO was launched using:
RESULT:
Template:
1QPO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24536 for 447 contacts (-54.9/contact) +
2D Compatibility (PS) -8884 + (NN) -2035 + (LL) -264
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -39819.0 ( -89.08 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_1QPO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QPO-query.scw
PDB file :
Tito_Scwrl_1QPO.pdb
: