Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGQITSALAPCIAYLKGNG-----AG-S----------APPACCNGIRSLNSAAKTTPDRQAACSCIKSAATGISG----IN-----YSTAAGLPGKCGINIPY--KISPSTDCKSIK
1W2Q Chain:A ((22-121))
-------RVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-----N-TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLDV--------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34674 for 431 contacts (-80.5/contact) +
2D Compatibility (PS) -7389 + (NN) -255 + (LL) 1072
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -43796.0 ( -101.61 by residue)
QMean score : 0.308
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: