Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGQVTSSLASCIPFLTK---GG-------------AVPASCCSGVRSLNAAAKTTPDRQ-VCNCLKSAAGAIP--G-F-------NANNAGILPGKCGVSIHYNISTSTNCATIKF
1SM7 Chain:A ((13-101))
--------QHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE--------DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI--------------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48364 for 409 contacts (-118.2/contact) +
2D Compatibility (PS) -5959 + (NN) 979 + (LL) 1784
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -56010.0 ( -136.94 by residue)
QMean score : 0.294
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: