Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ESAISCGTVTSDLTPCVGYLTSGK---G------------KPTPNCCGGVKKLAGLANTTPARRAVCGCLKQAYSQFP--N-A-------NSAAVSGLPGACGVNLPFKISLQTNCNTIN
1SM7 Chain:A ((13-101))
----------QHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE--------DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI-------------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42970 for 433 contacts (-99.2/contact) +
2D Compatibility (PS) -6169 + (NN) 85 + (LL) 1544
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -51360.0 ( -118.61 by residue)
QMean score : 0.319
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: