Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITCGQVSSSLAPCIGYVR----GGGA-V-----PPACCNGIRNVNNLARTTPDRRTACNCLKQLSGSIS-------G---VN----------PNNAAAL--PGKCGVNIPYKISASTNCATVK
1BEA Chain:A ((15-109))
-------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40424 for 386 contacts (-104.7/contact) +
2D Compatibility (PS) -6518 + (NN) -870 + (LL) 1576
1D Compatibility (HY) -4800 + (ID) 750
Total energy: -51786.0 ( -134.16 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: